Frequently Asked Questions
Below are some frequently asked questions. If your question is not listed in any of the topics below, please email Andrew.Jones@liv.ac.uk. Your suggestions will be used to improve our FAQs list.
- What is ProteoSuite?
- What kind of analyses are covered by ProteoSuite?
- Which are the system requirements to use ProteoSuite?
ProteoSuite is an open source software for the analysis of quantitative proteomics data which provides bench scientists to analyse their data using the most common techniques and standards. Additionally, ProteoSuite will enable submissions of complete proteomic workflows to public repositories and simple re-analysis of published data sets.
ProteoSuite is aimed to cover the majority of the quantitative techniques such as SILAC, spectral counting, iTRAQ and label free. Other techniques will be incorporated on demand.
ProteoSuite is being developed in Java which allows users to run the program in any platform (See the system requirements section).